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BaseInfo

ncRNA ID	ath-miRf10556-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	22
Mature sequence(if miRNA)	NA - GGAAGCUCUCUCUACAUAUAUA - NA
Stem-loop(if miRNA)	CAAAAGAG          C    C      A   A  -AGAAUCA     C     U U  A   CA           UU  A      UA   UGA GGAAUA        AGAGGGAGCU CCUU AGUCCA UCA AG        AUGAU CAAUU G CU CCG  UCAUUCAUUCA  UA CGAGUC  GUU   A ||||||        |||||||||| |||| |||||| ||| ||        ||||| ||||| | || |||  |||||||||||  || ||||||  ||| CCUUAU        UCUCUCUCGA GGAA UCAGGU AGU UC        UACUA GUUAA C GA GGC  AGUAAGUAGGU  AU GCUCAG  CGG   U       -AUAUACA          A    C      A   G  CAGCACUA     A     U -  A   UG           UU  G      --   UUU
Stem-loop sequence	GGAAUACAAAAGAGAGAGGGAGCUCCCUUCAGUCCAAUCAAAGAGAAUCAAUGAUCCAAUUUGUCUACCGCAUCAUUCAUUCAUUUAACGAGUCUAGUUUGAAUUUUGGCGACUCGGUAUUUGGAUGAAUGAGUCGGAAGCUAAUUGAAUCAUAUCACGACCUGUGAAUGGACUCAAGGAAGCUCUCUCUACAUAUAUAUUCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AF426254.1	ncRNA:22   AUAUAUACAUCUCUCUCGAAGG   1   ||*|*||||||||||||||||| targets:1017   UAAACAUGUAGAGAGAGCUUCC   1038 Target Full Sequence	1.0	Arabidopsis thaliana WRKY transcription factor 58 (WRKY58) mRNA, complete cds	NA	coding protein	psRNATarget
NM_110973.3	ncRNA:22   AUAUAUACAUCUCUCUCGAAGG   1   ||*|*||||||||||||||||| targets:1017   UAAACAUGUAGAGAGAGCUUCC   1038 Target Full Sequence	1.0	Arabidopsis thaliana WRKY DNA-binding protein 58 (WRKY58), partial mRNA	WRKY DNA-binding protein 58(WRKY58)	coding protein	psRNATarget
NM_001337311.1	ncRNA:22   AUAUAUACAUCUCUCUCGAAGG   1   ||*|*||||||||||||||||| targets:1292   UAAACAUGUAGAGAGAGCUUCC   1313 Target Full Sequence	1.0	Arabidopsis thaliana WRKY DNA-binding protein 58 (WRKY58), mRNA	WRKY DNA-binding protein 58(WRKY58)	coding protein	psRNATarget
NM_001337310.1	ncRNA:22   AUAUAUACAUCUCUCUCGAAGG   1   ||*|*||||||||||||||||| targets:1283   UAAACAUGUAGAGAGAGCUUCC   1304 Target Full Sequence	1.0	Arabidopsis thaliana WRKY DNA-binding protein 58 (WRKY58), mRNA	WRKY DNA-binding protein 58(WRKY58)	coding protein	psRNATarget
AF462864.1	ncRNA:22   AUAUAUACAUCUCUCUCGAAGG   1   *|*|*||||||||||||=|||| targets:2055   CAAAAAUGUAGAGAGAGUUUCC   2076 Target Full Sequence	2.5	Arabidopsis thaliana AT5g44100/MLN1_2 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001344533.1	ncRNA:22   AUAUAUACAUCUCUCUCGAAGG   1   *|*|*||||||||||||=|||| targets:2077   CAAAAAUGUAGAGAGAGUUUCC   2098 Target Full Sequence	2.5	Arabidopsis thaliana casein kinase I-like 7 (ckl7), mRNA	casein kinase I-like 7(ckl7)	coding protein	psRNATarget
NM_123777.4	ncRNA:22   AUAUAUACAUCUCUCUCGAAGG   1   *|*|*||||||||||||=|||| targets:2201   CAAAAAUGUAGAGAGAGUUUCC   2222 Target Full Sequence	2.5	Arabidopsis thaliana casein kinase I-like 7 (ckl7), mRNA	casein kinase I-like 7(ckl7)	coding protein	psRNATarget