ncRNA ID | ath-miR5649b |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | chr1:21360151-21360251 [-] |
Reference genome | TAIR10 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 9 - AUUGAAUAUGUUGGUUACUAU - 29 |
Stem-loop(if miRNA) |
U                                           UGCCA  UCAUAUUAUAGUAACCAACAUAUUCAAUACUUUCAAAUGAAGA     A  |||||||||||||||||||||||||||||||||||||||||||     U  AGUAUAAUAUCAUUGGUUGUAUAAGUUAUGAAAGUUUACUUCU     U A                                           UUUUA |
Stem-loop sequence | UUCAUAUUAUAGUAACCAACAUAUUCAAUACUUUCAAAUGAAGAUGCCAAUUAUUUUUCUUCAUUUGAAAGUAUUGAAUAUGUUGGUUACUAUAAUAUGAA |
1 | PMID:21940835
"High-resolution experimental and computational profiling of tissue-specific known and novel miRNAs in Arabidopsis"; Breakfield NW, Corcoran DL, Petricka JJ, Shen J, Sae-Seaw J, Rubio-Somoza I, Weigel D, Ohler U, Benfey PN; Genome Res. 22:163-176(2012). |