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BaseInfo

ncRNA ID	novel_bna_miR91
Species	Brassica napus
Class	miRNA
Genome position	ChrC2:680171-680381 [-]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR527230;SRR527228
Length	22
Mature sequence(if miRNA)	1 - CAUCAAUGAAAGGUAUGAUUCC - 22
Stem-loop(if miRNA)	--     -CA           AAU  A        A     --   C  ------     C              AA      U  G            C    UAU  A   AAUCA   CUUUCAUUGAU   GA AUCAAUAG GAAUG  CUA UG      AGCUC UACAGGCGAUUAGA  AUCUAA AU GCGAUAGUCUUG UCUC   GA G   |||||   |||||||||||   || |||||||| |||||  ||| ||      ||||| ||||||||||||||  |||||| || |||||||||||| ||||   ||   UUAGU   GAAAGUAACUA   CU UAGUUAUC CUUAC  GGU AC      UCGAG AUGUUCGUUAAUCU  UAGAUU UA CGCUAUUAGAAC AGAG   CU U CC     AUG           CUU  C        G     UA   A  CACUAG     A              CC      C  G            A    UAU  G
Stem-loop sequence	AAUCACACUUUCAUUGAUAAUGAAAUCAAUAGAGAAUGCUACUGAGCUCCUACAGGCGAUUAGAAAAUCUAAUAUGGCGAUAGUCUUGCUCUCUAUGAAGUGUCUAUGAGAACAAGAUUAUCGCGAUCUUAGAUCCUCUAAUUGCUUGUAAGAGCUGAUCACCAAUGGAUCAUUCGCUAUUGAUCUCUUCAUCAAUGAAAGGUAUGAUUCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013820218.1	ncRNA:22   CCUUAGUAUGGAAAGUAACUAC   1   |||||||||||||||||||||| targets:1727   GGAAUCAUACCUUUCAUUGAUG   1748 Target Full Sequence	0.0	PREDICTED: Brassica napus putative UDP-arabinose 4-epimerase 4 (LOC106380457), transcript variant X3, mRNA	putative UDP-arabinose 4-epimerase 4(LOC106380457)	coding protein	psRNATarget
XM_013820216.1	ncRNA:22   CCUUAGUAUGGAAAGUAACUAC   1   |||||||||||||||||||||| targets:1811   GGAAUCAUACCUUUCAUUGAUG   1832 Target Full Sequence	0.0	PREDICTED: Brassica napus putative UDP-arabinose 4-epimerase 4 (LOC106380457), transcript variant X1, mRNA	putative UDP-arabinose 4-epimerase 4(LOC106380457)	coding protein	psRNATarget
XM_013820217.1	ncRNA:22   CCUUAGUAUGGAAAGUAACUAC   1   |||||||||||||||||||||| targets:1827   GGAAUCAUACCUUUCAUUGAUG   1848 Target Full Sequence	0.0	PREDICTED: Brassica napus putative UDP-arabinose 4-epimerase 4 (LOC106380457), transcript variant X2, mRNA	putative UDP-arabinose 4-epimerase 4(LOC106380457)	coding protein	psRNATarget
XM_013820219.1	ncRNA:22   CCUUAGUAUGGAAAGUAACUAC   1   |||||||||||||||||||||| targets:1882   GGAAUCAUACCUUUCAUUGAUG   1903 Target Full Sequence	0.0	PREDICTED: Brassica napus putative UDP-arabinose 4-epimerase 4 (LOC106380457), transcript variant X4, mRNA	putative UDP-arabinose 4-epimerase 4(LOC106380457)	coding protein	psRNATarget
XM_013858274.1	ncRNA:22   CCUUAGUAUGGAAAGUAACUAC   1   |||||||**||||||||||||* targets:109   GGAAUCAGUCCUUUCAUUGAUA   130 Target Full Sequence	3.0	PREDICTED: Brassica napus uncharacterized LOC106417475 (LOC106417475), mRNA	uncharacterized LOC106417475(LOC106417475)	coding protein	psRNATarget