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BaseInfo

ncRNA ID	novel_bna_miR87
Species	Brassica napus
Class	miRNA
Genome position	ChrC2:7304149-7304248 [-]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR527230;SRR527231;SRR527233;SRR524726;SRR527228
Length	21
Mature sequence(if miRNA)	1 - GCUUACUCUCUCUCUGUCACC - 21
Stem-loop(if miRNA)	--       -                    GGCU   UU     -UU    UC   UGACAGA AGAGAGUGAGCACACAUGGU    UUC  GCAUG   UUUU  A   ||||||| ||||||||||||||||||||    |||  |||||   ||||   ACUGUCU UCUCUCAUUCGUGUGUAUCG    AAG  CGUAC   GGGA  A CC       C                    ----   UU     UUU    UU
Stem-loop sequence	UGACAGAAGAGAGUGAGCACACAUGGUGGCUUUCUUGCAUGUUUUUUUCAAUUAGGGUUUCAUGCUUGAAGCUAUGUGUGCUUACUCUCUCUCUGUCACC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013837785.1	ncRNA:21   CCACUGUCUCUCUCUCAUUCG   1   *|*||*||||||||||||||| targets:32   AGAGAGAGAGAGAGAGUAAGC   52 Target Full Sequence	2.0	PREDICTED: Brassica napus NEDD8-activating enzyme E1 regulatory subunit-like (LOC106397205), transcript variant X1, mRNA	NEDD8-activating enzyme E1 regulatory subunit-like(LOC106397205)	coding protein	psRNATarget
XM_013830257.1	ncRNA:21   CCACUGUCUCUCUCUCAUUCG   1   *||||*|||||||||||*||| targets:47   AGUGAGAGAGAGAGAGUCAGC   67 Target Full Sequence	2.5	PREDICTED: Brassica napus trigger factor-like protein TIG, Chloroplastic (LOC106389902), mRNA	trigger factor-like protein TIG, Chloroplastic(LOC106389902)	coding protein	psRNATarget
XM_013874769.1	ncRNA:21   CCA-CUGUCUCUCUCUCAUUCG   1   *||-|*|||||||||||||||| targets:78   UGUCGCCAGAGAGAGAGUAAGC   99 Target Full Sequence	3.0	PREDICTED: Brassica napus uncharacterized LOC106433931 (LOC106433931), mRNA	uncharacterized LOC106433931(BNAC06G18170D)	coding protein	psRNATarget
XM_013793025.1	ncRNA:21   CCA-CUGUCUCUCUCUCAUUCG   1   *||-|*|||||||||||||||| targets:76   UGUCGCCAGAGAGAGAGUAAGC   97 Target Full Sequence	3.0	PREDICTED: Brassica napus uncharacterized LOC106353292 (LOC106353292), mRNA	uncharacterized LOC106353292(BNAA07G19030D)	coding protein	psRNATarget