Search result

BaseInfo

ncRNA ID	novel_bna_miR74
Species	Brassica napus
Class	miRNA
Genome position	ChrA9:6912443-6912526 [+]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR527230
Length	21
Mature sequence(if miRNA)	1 - UGAACCCUUGAAUAAAUCAUA - 21
Stem-loop(if miRNA)	--          A                   -GUUU   UU   UGAACCCUUG AUAAAUCAUAAACUCUAGG     AAU  U   |||||||||| |||||||||||||||||||     |||  A   ACUUGGGAAC UAUUUAGUAUUUGAGAUUU     UUA  A GG          C                   AGUUU   UA
Stem-loop sequence	UGAACCCUUGAAUAAAUCAUAAACUCUAGGGUUUAAUUUUAAAUAUUUUUGAUUUAGAGUUUAUGAUUUAUCCAAGGGUUCAGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013863491.1	ncRNA:21   AUACUAAAUAAGUUCCCAAGU   1   ***|=||*||||||||||||| targets:1460   CCCGGUUGAUUCAAGGGUUCA   1480 Target Full Sequence	3.0	PREDICTED: Brassica napus phenylalanine N-monooxygenase-like (LOC106422714), mRNA	phenylalanine N-monooxygenase-like(LOC106422714)	coding protein	psRNATarget
XM_013859971.1	ncRNA:21   AUACUAAAUAAGUUCCCAAGU   1   ***|=||*||||||||||||| targets:1497   CUCGGUUGAUUCAAGGGUUCA   1517 Target Full Sequence	3.0	PREDICTED: Brassica napus phenylalanine N-monooxygenase-like (LOC106419211), mRNA	phenylalanine N-monooxygenase-like(LOC106419211)	coding protein	psRNATarget
XM_013886020.1	ncRNA:21   AUACUAAAUAAGUUCCCAAGU   1   ***|=||*||||||||||||| targets:1643   CUCGGUUGAUUCAAGGGUUCA   1663 Target Full Sequence	3.0	PREDICTED: Brassica napus phenylalanine N-monooxygenase-like (LOC106444566), mRNA	phenylalanine N-monooxygenase-like(LOC106444566)	coding protein	psRNATarget