ncRNA ID | novel_bna_miR67 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA9:28640582-28640668 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR527230;SRR527233;SRR1363495;SRR1363496 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UUGAAAGUCGUCCAUGAUAAG - 21 |
Stem-loop(if miRNA) |
--UU           AU            -C U     -    C     GAAAGUCGUCC  GAUAAGCAAAGU  G CCAGA UUUA U     |||||||||||  ||||||||||||  | ||||| |||| U     CUUUCAGCAGG  CUAUUUGUUUCA  C GGUCU AGAU C UGCU           CU            AA U     U    C |
Stem-loop sequence | UUGAAAGUCGUCCAUGAUAAGCAAAGUCGUCCAGAUUUACUUCCUAGAUUCUGGUCAAACUUUGUUUAUCUCGGACGACUUUCUCGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013894113.1 |
|
2.5 | PREDICTED: Brassica napus zinc finger BED domain-containing protein RICESLEEPER 1-like (LOC106452092), mRNA | zinc finger BED domain-containing protein RICESLEEPER 1-like(LOC106452092) | coding protein | psRNATarget |