ncRNA ID | ath-miRf10552-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 20 |
Mature sequence(if miRNA) | NA - GAUGGGUGUCGAGUGAUUCU - NA |
Stem-loop(if miRNA) |
U   U   --  U    A          --A     A  U  UGG ACU  GG GUCA UCGACACCCA   GUGGU UC G  ||| |||  || |||| ||||||||||   ||||| ||  ACU UGA  UC UAGU AGCUGUGGGU   UAUCA AG U A   -   AA  U    G          AGA     C  C |
Stem-loop sequence | UUGGUACUGGUGUCAAUCGACACCCAAGUGGUAUCUGUCGACACUAUAGAUGGGUGUCGAGUGAUUCUAAAGUUCAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_148233.1 |
|
2.5 | Arabidopsis thaliana Eukaryotic aspartyl protease family protein partial mRNA | Eukaryotic aspartyl protease family protein(AT4G04985) | coding protein | psRNATarget | |||||||||
BX828888.1 |
|
2.5 | Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL47ZG06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) | NA | coding protein | psRNATarget |