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BaseInfo

ncRNA ID ath-miRf10552-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - GAUGGGUGUCGAGUGAUUCU - NA
Stem-loop(if miRNA) U   U   --  U    A          --A     A  U
 UGG ACU  GG GUCA UCGACACCCA   GUGGU UC G
 ||| |||  || |||| ||||||||||   ||||| ||
 ACU UGA  UC UAGU AGCUGUGGGU   UAUCA AG U
A   -   AA  U    G          AGA     C  C
Stem-loop sequence UUGGUACUGGUGUCAAUCGACACCCAAGUGGUAUCUGUCGACACUAUAGAUGGGUGUCGAGUGAUUCUAAAGUUCAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_148233.1
ncRNA:20   UCUUAGUGAGCUGUGGGUAG   1
  **|||||||=||||||||||
targets:62   CUAAUCACUUGACACCCAUC   81

2.5 Arabidopsis thaliana Eukaryotic aspartyl protease family protein partial mRNA Eukaryotic aspartyl protease family protein(AT4G04985) coding protein psRNATarget
BX828888.1
ncRNA:20   UCUUAGUGAGCUGUGGGUAG   1
  **|||||||=||||||||||
targets:13   CUAAUCACUUGACACCCAUC   32

2.5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL47ZG06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget