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BaseInfo

ncRNA ID novel_bna_miR66
Species Brassica napus
Class miRNA
Genome position ChrA6:7652186-7652353 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR1363495
Length 24
Mature sequence(if miRNA) 1 - GGGGUUAUUAGCGGAAUAUAAGAA - 24
Stem-loop(if miRNA) ---GG    A    C            A UA     U  C              A          GU         UUUCAUUA
     GGUU UUAG GGAAUAUAAGAA U  UCUCU AA UUUUAACUAAAAAA UUAAGAACCG  UUUUAAAUA        G
     |||| |||| |||||||||||| |  ||||| || |||||||||||||| ||||||||||  |||||||||        U
     CUAA AAUC CCUUAUAUUUUU A  AGAGA UU AAAAUUGAUUUUUU AAUUCUUGGC  AGAAUUUAU        U
CAACA    G    A            C GC     U  U              C          UG         UCUAUAAA
Stem-loop sequence GGGGUUAUUAGCGGAAUAUAAGAAAUUAUCUCUUAACUUUUAACUAAAAAAAUUAAGAACCGGUUUUUAAAUAUUUCAUUAGUUAAAUAUCUUAUUUAAGAGUCGGUUCUUAACUUUUUUAGUUAAAAUUUUAGAGACGACUUUUUAUAUUCCACUAAGAAUCACAAC