ncRNA ID | novel_bna_miR61 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA8:2767865-2768030 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR527230;SRR527234 |
Length | 21 |
Mature sequence(if miRNA) | 1 - AAAUGCUCCAAUGUAUACCUC - 21 |
Stem-loop(if miRNA) |
--                A    A           CA       A                 AUAU       -CCA      A   AAAUGCUCCAAUGUAU CCUC AUAAUAGAGUU  UCUAUUU UAGAGGAAAAUAUAGAG    GUUAUUU    CCUCUA A   |||||||||||||||| |||| |||||||||||  ||||||| |||||||||||||||||    |||||||    ||||||   UUUACGAGGUUACAUA GGAG UAUUAUCUCAA  AGAUAAA AUCUCUUUUUAUAUCUC    UAAUAAA    GGAGAU U CU                C    A           AG       -                 CUUU       AAAC      A |
Stem-loop sequence | AAAUGCUCCAAUGUAUACCUCAAUAAUAGAGUUCAUCUAUUUAUAGAGGAAAAUAUAGAGAUAUGUUAUUUCCACCUCUAAAUAUAGAGGCAAAAAAUAAUUUUCCUCUAUAUUUUUCUCUAAAAUAGAGAAACUCUAUUAUAGAGGCAUACAUUGGAGCAUUUUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013818358.1 |
|
3.0 | PREDICTED: Brassica napus putative wall-associated receptor kinase-like 16 (LOC106378189), mRNA | putative wall-associated receptor kinase-like 16(LOC106378189) | coding protein | psRNATarget |