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BaseInfo

ncRNA ID	novel_bna_miR59
Species	Brassica napus
Class	miRNA
Genome position	ChrA8:16672707-16672817 [+]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR527230
Length	22
Mature sequence(if miRNA)	1 - GGGCAAAUACUCCAUUGGCAGA - 22
Stem-loop(if miRNA)	--        A    A       -AU   UUUCACUA   C       U   AAUA   GGGCAAAU CUCC UUGGCAG   AGU        CAU UAUAUUA CUA    U   |||||||| |||| |||||||   |||        ||| ||||||| |||    U   CCCGUUUA GAGG AACCGUC   UCG        GUA GUAUAGU GAU    A GC        -    A       AUU   UAAAAAAA   U       U   AAUA
Stem-loop sequence	GGGCAAAUACUCCAUUGGCAGAUAGUUUUCACUACAUCUAUAUUAUCUAAAUAUUAAUAAUAGUUGAUAUGUAUGAAAAAAAUGCUUUACUGCCAAAGGAGAUUUGCCCCG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013838522.1	ncRNA:22   AGACGGUUACCUCAUAAACGGG   1   ||||*=|||||||||||||||| targets:739   UCUGAUAAUGGAGUAUUUGCCC   760 Target Full Sequence	2.0	PREDICTED: Brassica napus serine/threonine-protein kinase tricorner-like (LOC106397894), transcript variant X3, mRNA	serine/threonine-protein kinase tricorner-like(LOC106397894)	coding protein	psRNATarget
XM_013838521.1	ncRNA:22   AGACGGUUACCUCAUAAACGGG   1   ||||*=|||||||||||||||| targets:833   UCUGAUAAUGGAGUAUUUGCCC   854 Target Full Sequence	2.0	PREDICTED: Brassica napus serine/threonine-protein kinase tricorner-like (LOC106397894), transcript variant X2, mRNA	serine/threonine-protein kinase tricorner-like(LOC106397894)	coding protein	psRNATarget
XM_013838520.1	ncRNA:22   AGACGGUUACCUCAUAAACGGG   1   ||||*=|||||||||||||||| targets:875   UCUGAUAAUGGAGUAUUUGCCC   896 Target Full Sequence	2.0	PREDICTED: Brassica napus serine/threonine-protein kinase tricorner-like (LOC106397894), transcript variant X1, mRNA	serine/threonine-protein kinase tricorner-like(LOC106397894)	coding protein	psRNATarget