ncRNA ID | novel_bna_miR54 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA7:2816862-2816972 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR527230 |
Length | 24 |
Mature sequence(if miRNA) | 88 - AGAGGCAAAUAUAGCAUUUUUCUA - 111 |
Stem-loop(if miRNA) |
--                                             CC  -   A   GAGAAAUGCUAUAUUUGCCUCUAUAAAUAGAGGAAUGCUAUUUUU  CC CUA A   |||||||||||||||||||||||||||||||||||||||||||||  || |||   CUUUUUACGAUAUAAACGGAGAUAUUUAUCUCCUUACGAUAAAAA  GG GAU U AU                                             AA  A   A |
Stem-loop sequence | GAGAAAUGCUAUAUUUGCCUCUAUAAAUAGAGGAAUGCUAUUUUUCCCCCUAAAUAUAGAGGAAAAAAAUAGCAUUCCUCUAUUUAUAGAGGCAAAUAUAGCAUUUUUCUA |