Search result

BaseInfo

ncRNA ID novel_bna_miR54
Species Brassica napus
Class miRNA
Genome position ChrA7:2816862-2816972 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR527230
Length 24
Mature sequence(if miRNA) 88 - AGAGGCAAAUAUAGCAUUUUUCUA - 111
Stem-loop(if miRNA) --                                             CC  -   A
  GAGAAAUGCUAUAUUUGCCUCUAUAAAUAGAGGAAUGCUAUUUUU  CC CUA A
  |||||||||||||||||||||||||||||||||||||||||||||  || |||
  CUUUUUACGAUAUAAACGGAGAUAUUUAUCUCCUUACGAUAAAAA  GG GAU U
AU                                             AA  A   A
Stem-loop sequence GAGAAAUGCUAUAUUUGCCUCUAUAAAUAGAGGAAUGCUAUUUUUCCCCCUAAAUAUAGAGGAAAAAAAUAGCAUUCCUCUAUUUAUAGAGGCAAAUAUAGCAUUUUUCUA