ncRNA ID | novel_bna_miR41 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA6:22031139-22031225 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR527230;SRR1363495;SRR527233;SRR1363496 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UUGAAAGUCGUCCAUGAUAAG - 21 |
Stem-loop(if miRNA) |
--UU           AU         A  -C U   -C     U     GAAAGUCGUCC  GAUAAGCAA GU  G CCA  AUUUA U     |||||||||||  ||||||||| ||  | |||  ||||| U     CUUUCAGCAGG  CUAUUCGUU CA  C GGU  UAGAU C UGCU           CU         C  AA U   AU     C |
Stem-loop sequence | UUGAAAGUCGUCCAUGAUAAGCAAAGUCGUCCACAUUUAUUUCCUAGAUUAUGGUCAAACCUUGCUUAUCUCGGACGACUUUCUCGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013894113.1 |
|
2.5 | PREDICTED: Brassica napus zinc finger BED domain-containing protein RICESLEEPER 1-like (LOC106452092), mRNA | zinc finger BED domain-containing protein RICESLEEPER 1-like(LOC106452092) | coding protein | psRNATarget |