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BaseInfo

ncRNA ID novel_bna_miR41
Species Brassica napus
Class miRNA
Genome position ChrA6:22031139-22031225 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR527230;SRR1363495;SRR527233;SRR1363496
Length 21
Mature sequence(if miRNA) 1 - UUGAAAGUCGUCCAUGAUAAG - 21
Stem-loop(if miRNA) --UU           AU         A  -C U   -C     U
    GAAAGUCGUCC  GAUAAGCAA GU  G CCA  AUUUA U
    |||||||||||  ||||||||| ||  | |||  ||||| U
    CUUUCAGCAGG  CUAUUCGUU CA  C GGU  UAGAU C
UGCU           CU         C  AA U   AU     C
Stem-loop sequence UUGAAAGUCGUCCAUGAUAAGCAAAGUCGUCCACAUUUAUUUCCUAGAUUAUGGUCAAACCUUGCUUAUCUCGGACGACUUUCUCGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013894113.1
ncRNA:21   GAAUAGUACCUGCUGAAAGUU   1
  **|*||||||||||||||*||
targets:155   GAUCUCAUGGACGACUUUGAA   175

2.5 PREDICTED: Brassica napus zinc finger BED domain-containing protein RICESLEEPER 1-like (LOC106452092), mRNA zinc finger BED domain-containing protein RICESLEEPER 1-like(LOC106452092) coding protein psRNATarget