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BaseInfo

ncRNA ID novel_bna_miR33
Species Brassica napus
Class miRNA
Genome position ChrA4:23824899-23825066 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR527230;SRR527232;SRR527234;SRR527228;SRR527229
Length 20
Mature sequence(if miRNA) 1 - GAGCUUUCUUCGGUCCACUC - 20
Stem-loop(if miRNA) --     UU          CU      AUAAUAU    -         -GA    C AC        C  AA     A   AAAGAA
  GAGCU  CUUCGGUCCA  CAUAGA       GUGA GAUUUAAUU   CUCU G  UCAUUCAU CA  UACCA AUG      U
  |||||  ||||||||||  ||||||       |||| |||||||||   |||| |  |||||||| ||  ||||| |||
  CUCGA  GAAGUCAGGU  GUAUCU       CACU CUAAGUUAA   GAGA C  AGUAAGUA GU  AUGGU UAC      A
CC     GG          UC      ----CUU    U         ACA    U GU        A  AA     A   AGAUGU
Stem-loop sequence GAGCUUUCUUCGGUCCACUCAUAGAAUAAUAUGUGAGAUUUAAUUGACUCUCGACUCAUUCAUCCAAAUACCAAAUGAAAGAAUAUGUAGACAUAUGGUAAAUGAAUGAAUGAUGCUAGAGACAAAUUGAAUCUUCACUUCUCUAUGCUUGGACUGAAGGGAGCUCCC