ncRNA ID | novel_bna_miR25 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA3:45436316-45436402 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR527229 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGGGCAUCUCCAAUGCAACACUAA - 24 |
Stem-loop(if miRNA) |
--   G     C      A                   -   AG   AGG CAUCU CAAUGC ACACUAAAAUUUACUCUAU UUU  A   ||| ||||| |||||| ||||||||||||||||||| |||   UCU GUAGA GUUACG UGUGAUUUUAAAUGAGAUA AAA  G AA   G     U      A                   U   GU |
Stem-loop sequence | AGGGCAUCUCCAAUGCAACACUAAAAUUUACUCUAUUUUAGAGUGAAAUAUAGAGUAAAUUUUAGUGUAGCAUUGUAGAUGGUCUAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013803034.1 |
|
3.0 | PREDICTED: Brassica napus uncharacterized LOC106363260 (LOC106363260), mRNA | uncharacterized LOC106363260(LOC106363260) | coding protein | psRNATarget | |||||||||
XM_013802610.1 |
|
3.0 | PREDICTED: Brassica napus uncharacterized LOC106362763 (LOC106362763), mRNA | uncharacterized LOC106362763(LOC106362763) | coding protein | psRNATarget |