Search result

BaseInfo

ncRNA ID	novel_bna_miR14
Species	Brassica napus
Class	miRNA
Genome position	ChrA1:16019484-16019647 [+]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR527229
Length	24
Mature sequence(if miRNA)	1 - AGAGCAUCUCCAACUCCACUCCAU - 24
Stem-loop(if miRNA)	--                    CC      -------------------------------------  AUGCAAAAUGGAGUGAUGAACAAUCAAAAAU   AGAGCAUCUCCAACUCCACU  AUAAUU                                     UA                               C   ||||||||||||||||||||  ||||||                                     ||                               U   UCUCGUAGAGGUUGGGGUGA  UAUUAA                                     UG                               C AA                    AA      AUGACAUUUUACUUCACCCUUUAUCUCACUACUUAUU  UUUUUUCACUAAUUACGUAUUUACCUCAUUA
Stem-loop sequence	AGAGCAUCUCCAACUCCACUCCAUAAUUUAAUGCAAAAUGGAGUGAUGAACAAUCAAAAAUCUCAUUACUCCAUUUAUGCAUUAAUCACUUUUUUGUUUAUUCAUCACUCUAUUUCCCACUUCAUUUUACAGUAAAUUAUAAAGUGGGGUUGGAGAUGCUCUAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013798333.1	ncRNA:24   UACCUCACCUCAACCUCUACGAGA   1   *|||**|||||||*|||||||||| targets:1301   UUGGUUUGGAGUUUGAGAUGCUCU   1324 Target Full Sequence	2.5	PREDICTED: Brassica napus pollen-specific protein SF21-like (LOC106358518), mRNA	pollen-specific protein SF21-like(LOC106358518)	coding protein	psRNATarget