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BaseInfo

ncRNA ID novel_bna_miR10
Species Brassica napus
Class miRNA
Genome position ChrC9:5168455-5168533 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR527229
Length 21
Mature sequence(if miRNA) 1 - AGAACUCCACCCUAAGAAACC - 21
Stem-loop(if miRNA) --       CACC         C  G A    A      
  AGAACUC    CUAAGAAAC CU G UAAU AUGCUCU
  |||||||    ||||||||| || | |||| ||||||A
  UCUUGAG    GAUUCUUUG GA U AUUA UACGAGA
AU       ACAA         A  G A    G      
Stem-loop sequence AGAACUCCACCCUAAGAAACCCUGGAUAAUAAUGCUCUAAGAGCAUGAUUAAUGAGAGUUUCUUAGAACAGAGUUCUUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013829109.1
ncRNA:21   CCAAAGAAUCCCACCUCAAGA   1
  ||*||||||||||||||||||
targets:3899   GGGUUCUUAGGGUGGAGUUCU   3919

1.0 PREDICTED: Brassica napus disease resistance protein TAO1-like (LOC106388935), mRNA disease resistance protein TAO1-like(LOC106388935) coding protein psRNATarget