ncRNA ID | novel_bna_miR4 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC9:14812866-14812964 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR527229 |
Length | 21 |
Mature sequence(if miRNA) | 79 - AAGAGUAACACGACUCCAACA - 99 |
Stem-loop(if miRNA) |
--   C    U          U           GUA    AU   AAUU   UUG AGUC UGUUACUCUU AUUAAUCAUGG   UGUU  CAU    U   ||| |||| |||||||||| |||||||||||   ||||  |||    U   AAC UCAG ACAAUGAGAA UAAUUAGUACC   ACAA  GUA    U AC   C    C          C           AAC    AU   AAUU |
Stem-loop sequence | UUGCAGUCUUGUUACUCUUUAUUAAUCAUGGGUAUGUUAUCAUAAUUUUUUUAAAUGUAAACACAACCAUGAUUAAUCAAGAGUAACACGACUCCAACA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013823476.1 |
|
3.0 | PREDICTED: Brassica napus agmatine deiminase-like (LOC106383361), partial mRNA | agmatine deiminase-like(LOC106383361) | coding protein | psRNATarget | |||||||||
XM_013824911.1 |
|
3.0 | PREDICTED: Brassica napus agmatine deiminase-like (LOC106384982), mRNA | agmatine deiminase-like(LOC106384982) | coding protein | psRNATarget |