ncRNA ID | novel_bna_miR2 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC6:23117346-23117398 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR1363495 |
Length | 24 |
Mature sequence(if miRNA) | 30 - AGGUCUGGAGAAAUGAAGAUGCAA - 53 |
Stem-loop(if miRNA) |
--       -        AA   AA  A   GCGUCUU GUUUCUCU  AGA  UA A   ||||||| ||||||||  |||  ||   CGUAGAA UAAAGAGG  UCU  AU A AA       G        --   GG  G |
Stem-loop sequence | GCGUCUUGUUUCUCUAAAGAAAUAAAAGUAGGUCUGGAGAAAUGAAGAUGCAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013787348.1 |
|
2.5 | PREDICTED: Brassica napus bifunctional L-3-cyanoalanine synthase/cysteine synthase-like (LOC106347750), transcript variant X2, mRNA | bifunctional L-3-cyanoalanine synthase/cysteine synthase-like(LOC106347750) | coding protein | psRNATarget | |||||||||
XM_013867316.1 |
|
2.5 | PREDICTED: Brassica napus bifunctional L-3-cyanoalanine synthase/cysteine synthase-like (LOC106426599), transcript variant X2, mRNA | bifunctional L-3-cyanoalanine synthase/cysteine synthase-like(LOC106426599) | coding protein | psRNATarget |