Search result

BaseInfo

ncRNA ID	ath-miRf10545-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - AGAAGACUCUGAAGCUGGCA - NA
Stem-loop(if miRNA)	GG    G  A      --            UC   CUU UG     G G   UCGA UG UUAGUU  GGAGUCUUCUUU  UUC   G  CUCGA U U   |||| || ||||||  ||||||||||||  |||   |  ||||| |   AGCU AC GGUCGA  UCUCAGAAGAGG  AAG   C  GAGUU G C UG    A  -      AG            UA   --- GU     G U
Stem-loop sequence	GGUCGAGUGAUUAGUUGGAGUCUUCUUUUCUUCCUUGUGCUCGAGUGUCUGGUUGAGUGCGAAAUGGAGAAGACUCUGAAGCUGGCAAUCGAGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
DQ069808.1	ncRNA:20   ACGGUCGAAGUCUCAGAAGA   1   *||||||||||||||||||| targets:396   CGCCAGCUUCAGAGUCUUCU   415 Target Full Sequence	0.0	Arabidopsis thaliana At2g10880 mRNA, partial sequence	NA	coding protein	psRNATarget
EF183192.1	ncRNA:20   ACGGUCGAAGUCUCAGAAGA   1   |||=|||||||||||||||| targets:761   UGCUAGCUUCAGAGUCUUCU   780 Target Full Sequence	1.0	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183193.1	ncRNA:20   ACGGUCGAAGUCUCAGAAGA   1   |||=|||||||||||||||| targets:1088   UGCUAGCUUCAGAGUCUUCU   1107 Target Full Sequence	1.0	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183191.1	ncRNA:20   ACGGUCGAAGUCUCAGAAGA   1   |||=|||||||||||||||| targets:1136   UGCUAGCUUCAGAGUCUUCU   1155 Target Full Sequence	1.0	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget
AY231407.1	ncRNA:20   ACGGUCGAAGUCUCAGAAGA   1   |||||||*|||||||||||| targets:741   UGCCAGCYUCAGAGUCUUCU   760 Target Full Sequence	1.5	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget