ncRNA ID | ath-miR158b |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | chr1:20772218-20772302 [+] |
Reference genome | TAIR10 |
Source | miRBase |
Length | 20 |
Mature sequence(if miRNA) | 56 - CCCCAAAUGUAGACAAAGCA - 75 |
Stem-loop(if miRNA) |
U U CUU CU -A UG A AUC C GUG CUUUGUCUACA UUUGG AAAGG AUG U ||| | ||| ||||||||||| ||||| ||||| ||| UAG G CAU GAAACAGAUGU AAACC UUUUC UAC A U C AAC -- CC GU U |
Stem-loop sequence | AUCUCUGUGCUUCUUUGUCUACACUUUUGGAAAAGGUGAUGAUAUCAUUGCUUUUCCCCAAAUGUAGACAAAGCAAUACCGUGAU |
1 | PMID:15200956
"Computational identification of plant microRNAs and their targets, including a stress-induced miRNA"; Jones-Rhoades MW, Bartel DP; Mol Cell. 14:787-799(2004). |
2 | PMID:17182867
"A diverse and evolutionarily fluid set of microRNAs in Arabidopsis thaliana"; Rajagopalan R, Vaucheret H, Trejo J, Bartel DP; Genes Dev. 20:3407-3425(2006). |
3 | PMID:19815687
"Hypoxia-responsive microRNAs and trans-acting small interfering RNAs in Arabidopsis"; Moldovan D, Spriggs A, Yang J, Pogson BJ, Dennis ES, Wilson IW; J Exp Bot. 61:165-177(2010). |