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BaseInfo

ncRNA ID ath-miR158b
Species Arabidopsis thaliana
Class miRNA
Genome position chr1:20772218-20772302 [+]
Reference genome TAIR10
Source miRBase
Length 20
Mature sequence(if miRNA) 56 - CCCCAAAUGUAGACAAAGCA - 75
Stem-loop(if miRNA)    U U   CUU           CU     -A     UG   A
AUC C GUG   CUUUGUCUACA  UUUGG  AAAGG  AUG U
||| | |||   |||||||||||  |||||  |||||  |||
UAG G CAU   GAAACAGAUGU  AAACC  UUUUC  UAC A
   U C   AAC           --     CC     GU   U
Stem-loop sequence AUCUCUGUGCUUCUUUGUCUACACUUUUGGAAAAGGUGAUGAUAUCAUUGCUUUUCCCCAAAUGUAGACAAAGCAAUACCGUGAU

Reference

1 PMID:15200956
"Computational identification of plant microRNAs and their targets, including a stress-induced miRNA";
Jones-Rhoades MW, Bartel DP;
Mol Cell. 14:787-799(2004).
2 PMID:17182867
"A diverse and evolutionarily fluid set of microRNAs in Arabidopsis thaliana";
Rajagopalan R, Vaucheret H, Trejo J, Bartel DP;
Genes Dev. 20:3407-3425(2006).
3 PMID:19815687
"Hypoxia-responsive microRNAs and trans-acting small interfering RNAs in Arabidopsis";
Moldovan D, Spriggs A, Yang J, Pogson BJ, Dennis ES, Wilson IW;
J Exp Bot. 61:165-177(2010).