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BaseInfo

ncRNA ID ath-miRf10541-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - UUCCCUCGCAAAUUUGCGAG - NA
Stem-loop(if miRNA)            A             U     -A   GCG  CGU
AGUCUCUCGCA GAUUUGCGAGGGA UUGCA  CGU   UC   G
||||||||||| ||||||||||||| |||||  |||   ||   U
UUAGGGAGCGU UUAAACGCUCCCU AACGU  GUA   AG   U
           -             U     CC   AAA  AUC
Stem-loop sequence AGUCUCUCGCAAGAUUUGCGAGGGAUUUGCAACGUGCGUCCGUGUUCUAGAAAAAUGCCUGCAAUUCCCUCGCAAAUUUGCGAGGGAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_113908.1
ncRNA:20   GAGCGUUUAAACGCUCCCUU   1
  ||||||||||||||||||||
targets:1141   CUCGCAAAUUUGCGAGGGAA   1160

0.0 Arabidopsis thaliana hypothetical protein partial mRNA hypothetical protein(AT3G29796) coding protein psRNATarget
NM_113908.1
ncRNA:20   GAGCGUUUAAACGCUCCCUU   1
  |||*||||||||=|||||||
targets:1292   CUCACAAAUUUGUGAGGGAA   1311

2.5 Arabidopsis thaliana hypothetical protein partial mRNA hypothetical protein(AT3G29796) coding protein psRNATarget