ncRNA ID | novel_ath_miR1046 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr1:17824946-17825026 [-] |
Reference genome | TAIR10 |
Source | SRR1266865 |
Length | 23 |
Mature sequence(if miRNA) | 1 - AAGUAGUACUCAAACCCGAGAUA - 23 |
Stem-loop(if miRNA) |
--         UUA        -     G  -----    UG  U   UUUCGGGUU   UGGGUACU UUUAU UA     UGUU  GG A   |||||||||   |||||||| ||||| ||     ||||  ||   AGAGCCCAA   ACUCAUGA GAAUG GU     ACAG  UU U AU         ---        U     G  UUGAA    GU  A |
Stem-loop sequence | UUUCGGGUUUUAUGGGUACUUUUAUGUAUGUUUGGGUAUAUUUGGACAAAGUUUGGGUAAGUAGUACUCAAACCCGAGAUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_112303.4 |
|
3.0 | Arabidopsis thaliana GRIP/coiled-coil protein mRNA | GRIP/coiled-coil protein(AT3G14430) | coding protein | psRNATarget | |||||||||
AK228144.1 |
|
3.0 | Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL14-61-E11 | NA | coding protein | psRNATarget | |||||||||
AY087008.1 |
|
3.0 | Arabidopsis thaliana clone 30464 mRNA, complete sequence | NA | coding protein | psRNATarget |