ncRNA ID | novel_ath_miR1043 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr2:8756241-8756412 [-] |
Reference genome | TAIR10 |
Source | SRR1266864 |
Length | 18 |
Mature sequence(if miRNA) | 1 - AUUUUGAAGGACGCCUGU - 18 |
Stem-loop(if miRNA) |
-AU   UAG     -----GGU      GG  AG  U GG  -     GG        UUC     U       U  -    GCU   UGU    GGU   GUUCU        UAAUCC  CC  GU C  UU CAUCU  GUAAAGAU   CGGUU GAUUUCU UU AGGA   GUU   U    |||   |||||        ||||||  ||  || |  || |||||  ||||||||   ||||| ||||||| || ||||   |||   G    CCG   CAGGA        GUUGGG  GG  CA G  AA GUAGG  CGUUUUUG   GUUAA UUAGAGA AA UCCU   UAG   U UGU   ---     AGUUUUAU      -A  GA  C AA  C     AG        UUU     U       U  C    -AU   UAU |
Stem-loop sequence | AUGGUUAGGUUCUGGUUAAUCCGGCCAGGUUCGGUUCAUCUGGGUAAAGAUUUCCGGUUUGAUUUCUUUUAGGAGCUGUUUGUUGUUAUGAUUAUCCUCAAUAGAGAUUUAAUUGUUUGUUUUUGCGAGGAUGCAAAAGCACAGGGAGGGUUGUAUUUUGAAGGACGCCUGU |