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BaseInfo

ncRNA ID novel_ath_miR1043
Species Arabidopsis thaliana
Class miRNA
Genome position Chr2:8756241-8756412 [-]
Reference genome TAIR10
Source SRR1266864
Length 18
Mature sequence(if miRNA) 1 - AUUUUGAAGGACGCCUGU - 18
Stem-loop(if miRNA) -AU   UAG     -----GGU      GG  AG  U GG  -     GG        UUC     U       U  -    GCU   UGU
   GGU   GUUCU        UAAUCC  CC  GU C  UU CAUCU  GUAAAGAU   CGGUU GAUUUCU UU AGGA   GUU   U
   |||   |||||        ||||||  ||  || |  || |||||  ||||||||   ||||| ||||||| || ||||   |||   G
   CCG   CAGGA        GUUGGG  GG  CA G  AA GUAGG  CGUUUUUG   GUUAA UUAGAGA AA UCCU   UAG   U
UGU   ---     AGUUUUAU      -A  GA  C AA  C     AG        UUU     U       U  C    -AU   UAU
Stem-loop sequence AUGGUUAGGUUCUGGUUAAUCCGGCCAGGUUCGGUUCAUCUGGGUAAAGAUUUCCGGUUUGAUUUCUUUUAGGAGCUGUUUGUUGUUAUGAUUAUCCUCAAUAGAGAUUUAAUUGUUUGUUUUUGCGAGGAUGCAAAAGCACAGGGAGGGUUGUAUUUUGAAGGACGCCUGU