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BaseInfo

ncRNA ID ath-miRf10540-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - UCGCAAAUUUGCGAGGGAUU - NA
Stem-loop(if miRNA) -GA    AC           A             U     -A   GCG  CGU
   GGAA  AGUCUCUCGCA GAUUUGCGAGGGA UUGCA  CGU   UC   G
   ||||  ||||||||||| ||||||||||||| |||||  |||   ||   U
   CCUU  UUAGGGAGCGU UUAAACGCUCCCU AACGU  GUA   AG   U
CUC    CA           -             U     CC   AAA  AUC
Stem-loop sequence GAGGAAACAGUCUCUCGCAAGAUUUGCGAGGGAUUUGCAACGUGCGUCCGUGUUCUAGAAAAAUGCCUGCAAUUCCCUCGCAAAUUUGCGAGGGAUUACUUCCCUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_113908.1
ncRNA:20   UUAGGGAGCGUUUAAACGCU   1
  ||*|||||||||||||||||
targets:793   AAGCCCUCGCAAAUUUGCGA   812

1.0 Arabidopsis thaliana hypothetical protein partial mRNA hypothetical protein(AT3G29796) coding protein psRNATarget
NM_113908.1
ncRNA:20   UUAGGGAGCGUUUAAACGCU   1
  ||*|||||||||||||||||
targets:1074   AAGCCCUCGCAAAUUUGCGA   1093

1.0 Arabidopsis thaliana hypothetical protein partial mRNA hypothetical protein(AT3G29796) coding protein psRNATarget
NM_113908.1
ncRNA:20   UUAGGGAGCGUUUAAACGCU   1
  ||*|||||||*|||||||||
targets:1225   AAGCCCUCGCUAAUUUGCGA   1244

2.5 Arabidopsis thaliana hypothetical protein partial mRNA hypothetical protein(AT3G29796) coding protein psRNATarget