ncRNA ID | ath-miRf10540-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 20 |
Mature sequence(if miRNA) | NA - UCGCAAAUUUGCGAGGGAUU - NA |
Stem-loop(if miRNA) |
-GA    AC           A             U     -A   GCG  CGU    GGAA  AGUCUCUCGCA GAUUUGCGAGGGA UUGCA  CGU   UC   G    ||||  ||||||||||| ||||||||||||| |||||  |||   ||   U    CCUU  UUAGGGAGCGU UUAAACGCUCCCU AACGU  GUA   AG   U CUC    CA           -             U     CC   AAA  AUC |
Stem-loop sequence | GAGGAAACAGUCUCUCGCAAGAUUUGCGAGGGAUUUGCAACGUGCGUCCGUGUUCUAGAAAAAUGCCUGCAAUUCCCUCGCAAAUUUGCGAGGGAUUACUUCCCUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_113908.1 |
|
1.0 | Arabidopsis thaliana hypothetical protein partial mRNA | hypothetical protein(AT3G29796) | coding protein | psRNATarget | |||||||||
NM_113908.1 |
|
1.0 | Arabidopsis thaliana hypothetical protein partial mRNA | hypothetical protein(AT3G29796) | coding protein | psRNATarget | |||||||||
NM_113908.1 |
|
2.5 | Arabidopsis thaliana hypothetical protein partial mRNA | hypothetical protein(AT3G29796) | coding protein | psRNATarget |