| ncRNA ID | novel_ath_miR1040 |
| Species | Arabidopsis thaliana |
| Class | miRNA |
| Genome position | Chr1:14497429-14497631 [+] |
| Reference genome | TAIR10 |
| Source | SRR1266864 |
| Length | 22 |
| Mature sequence(if miRNA) | 182 - GAUUCGGAGCUGUUGACGAGCU - 203 |
| Stem-loop(if miRNA) |
UUU --- G --A -UGG GG -UG UUU UU - -AUU UC UCACUUUAGCAUCAUAUCAUCACUGUUUU GCUUG A GGCU AAUU G AGU AUAAGUGUGUA UGCAUGU GAGC AUCC UG A A ||||| | |||| |||| | ||| ||||||||||| ||||||| |||| |||| || | U CGAGC U UCGA UUAG C UCG UGUUUAUACAU ACGUACG UUUG UAGG GU A A --U AGU G GGC UGGA UU UUG UGU -U A AUUU -- CGUUUCACCACUGUUUACUACUCUUUACC |
| Stem-loop sequence | UUUGCUUGAGGGCUAAAUUUGGGGGAGUUGAUAAGUGUGUAUUUUGCAUGUUUGAGCAUCCAUUUGUCAUCACUUUAGCAUCAUAUCAUCACUGUUUUAUACCAUUUCUCAUCAUUUGUCACCACUUUGCAUGUUUAGGAUAGUUUUGCAUGCAUGUUACAUAUUUGUGUUGCUUUCAGGUGAUUCGGAGCUGUUGACGAGCU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| EF183005.1 |
|
1.5 | Arabidopsis thaliana clone asmbl_10069 unknown mRNA sequence | NA | coding protein | psRNATarget |