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BaseInfo

ncRNA ID	ath-miRf10539-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	23
Mature sequence(if miRNA)	NA - CACUCGACCUCAUGGUCGAGUGA - NA
Stem-loop(if miRNA)	G A           UG           AUG G   GAGUGG       -AGA            AAGU GAU A GUCACUCGGCC  GGGGUCGAGUG   U AUC      UGUCAGA    UACUCGACUUCC    U ||| | |||||||||||  |||||||||||   | |||      |||||||    ||||||||||||    G CUA U UAGUGAGCUGG  CUCCAGCUCAC   A UGG      GUAGUCU    GUGAGCUGGAGG    A    G G           UA           AGA G   -AGGUA       GGUG            AGUG
Stem-loop sequence	GAUGAAGUCACUCGGCCUGGGGGUCGAGUGAUGUGAUCGAGUGGUGUCAGAAGAUACUCGACUUCCAAGUUGAGUGAGGAGGUCGAGUGGUGGUCUGAUGAUGGAGGUGAAGACACUCGACCUCAUGGUCGAGUGAUGUGAUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EF183194.1	ncRNA:23   AGUGAGCUGGUACUCCAGCUCAC   1   ||||||||||||||||||||||| targets:516   UCACUCGACCAUGAGGUCGAGUG   538 Target Full Sequence	0.0	Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence	NA	coding protein	psRNATarget
NM_103391.1	ncRNA:23   AGUGAGCUGGUACUCCAGCUCAC   1   *||||||||||*||||||||||| targets:1150   CCACUCGACCACGAGGUCGAGUG   1172 Target Full Sequence	1.5	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
EF183042.1	ncRNA:23   AGUGAGCUGGUACUCCAGCUCAC   1   *||||||||||*||||||||||* targets:1526   CCACUCGACCACGAGGUCGAGUA   1548 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget