ncRNA ID | novel_ath_miR1025 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr2:4209383-4209514 [+] |
Reference genome | TAIR10 |
Source | ERR1297318 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GUGUGCAGAACCUUUGGAUCGAGU - 24 |
Stem-loop(if miRNA) |
--    G     C    --           GCA    CAAAGAUUA   CCUAUACCACAAAAACAAGC   GUGU CAGAA CUUU  GGAUCGAGUUU   UGCA         GUA                    A   |||| ||||| ||||  |||||||||||   ||||         |||                    G   UAUA GUCUU GAAA  UCUAGUUCAAG   AUGU         GUU                    A UC    -     U    AU           AAA    ----AAAUA   CAAUGAUUGAGUAUAAAAGC |
Stem-loop sequence | GUGUGCAGAACCUUUGGAUCGAGUUUGCAUGCACAAAGAUUAGUACCUAUACCACAAAAACAAGCAGACGAAAAUAUGAGUUAGUAACUUGAUAAAUGUAAAAGAACUUGAUCUUAAAAGUUUCUGAUAUCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK230036.1 |
|
0.0 | Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL22-60-F14 | NA | coding protein | psRNATarget |