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BaseInfo

ncRNA ID novel_ath_miR1020
Species Arabidopsis thaliana
Class miRNA
Genome position Chr5:4479439-4479543 [-]
Reference genome TAIR10
Source SRR1266860;SRR1312901
Length 24
Mature sequence(if miRNA) 1 - UGGGACUGCCUAAGCUAAAGGCUU - 24
Stem-loop(if miRNA) --     A      -    A            U    AAA   A       CCA
  GCCUU UAGCUU GGCA UCUCAUGUCAAA AAGG   AGA GAGGAAC   A
  ||||| |||||| |||| |||||||||||| ||||   ||| |||||||   G
  CGGAA AUCGAA CCGU AGGGUACAGUUU UUCC   UCU CUCUUUG   G
UU     -      U    C            C    --A   A       UAU
Stem-loop sequence GCCUUAUAGCUUGGCAAUCUCAUGUCAAAUAAGGAAAAGAAGAGGAACCCAAGGUAUGUUUCUCAUCUACCUUCUUUGACAUGGGACUGCCUAAGCUAAAGGCUU