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BaseInfo

ncRNA ID	novel_ath_miR1019
Species	Arabidopsis thaliana
Class	miRNA
Genome position	Chr5:9098814-9098897 [+]
Reference genome	TAIR10
Source	SRR1266860
Length	21
Mature sequence(if miRNA)	64 - UCAAUAGAUUGGACUAUGUAU - 84
Stem-loop(if miRNA)	--                    G    A UA   --     CU   AUAUAGUCCAAUCUAUUGAA UACU G  CAC  CAGCU  A   |||||||||||||||||||| |||| |  |||  |||||   UGUAUCAGGUUAGAUAACUU AUGA U  GUG  GUCGA  A UA                    G    A GG   UA     AU
Stem-loop sequence	AUAUAGUCCAAUCUAUUGAAGUACUAGUACACCAGCUCUAAUAAGCUGAUGUGGGUAAGUAGUUCAAUAGAUUGGACUAUGUAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BX832323.1	ncRNA:21   UAUGUAUCAGGUUAGAUAACU   1   |||=||||||||||||||||| targets:1518   AUAUAUAGUCCAAUCUAUUGA   1538 Target Full Sequence	1.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH65ZH02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
X73417.1	ncRNA:21   UAUGUAUCAGGUUAGAUAACU   1   |||=||||||||||||||||| targets:1526   AUAUAUAGUCCAAUCUAUUGA   1546 Target Full Sequence	1.0	A.thaliana HEM15 mRNA for ferrochelatase	NA	coding protein	psRNATarget
AK226466.1	ncRNA:21   UAUGUAUCAGGUUAGAUAACU   1   |||=||||||||||||||||| targets:1517   AUAUAUAGUCCAAUCUAUUGA   1537 Target Full Sequence	1.0	Arabidopsis thaliana mRNA for ferrochelatase-I, complete cds, clone: RAFL06-67-J12	NA	coding protein	psRNATarget
AY078959.1	ncRNA:21   UAUGUAUCAGGUUAGAUAACU   1   |||=||||||||||||||||| targets:1632   AUAUAUAGUCCAAUCUAUUGA   1652 Target Full Sequence	1.0	Arabidopsis thaliana AT5g26030/T1N24_17 mRNA, complete sequence	NA	coding protein	psRNATarget
NM_122504.5	ncRNA:21   UAUGUAUCAGGUUAGAUAACU   1   |||=||||||||||||||||| targets:1684   AUAUAUAGUCCAAUCUAUUGA   1704 Target Full Sequence	1.0	Arabidopsis thaliana ferrochelatase 1 (FC1), mRNA	ferrochelatase 1(FC1)	coding protein	psRNATarget