ncRNA ID | novel_ath_miR1015 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr4:12352961-12353130 [+] |
Reference genome | TAIR10 |
Source | SRR1266860 |
Length | 21 |
Mature sequence(if miRNA) | 150 - UUGGACUGAAGGGAGCUCCCU - 170 |
Stem-loop(if miRNA) |
--A          G      U   C   UC  G U           A -  U   AC        C  AA  C      GCCAAAA    GAGCUUCCUU AGUCCA UCA AGG  GU A AUGAUUCAAUU G CU CCG  UCAUUCAU CA  UA CGAGUC       U    |||||||||| |||||| ||| |||  || | ||||||||||| | || |||  |||||||| ||  || ||||||    CUCGAGGGAA UCAGGU AGU UCU  UA U UACUAGGUUAA C GA GGC  AGUAAGUA GU  AU GCUCAG       U UCC          G      U   U   CU  G -           A A  U   GU        A  AA  U      AUCAAAC |
Stem-loop sequence | AGAGCUUCCUUGAGUCCAUUCACAGGUCGUGAUAUGAUUCAAUUAGCUUCCGACUCAUUCAUCCAAAUACCGAGUCGCCAAAAUUCAAACUAGACUCGUUAAAUGAAUGAAUGAUGCGGUAGACAAAUUGGAUCAUUGAUUCUCUUUGAUUGGACUGAAGGGAGCUCCCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_128252.6 |
|
1.5 | Arabidopsis thaliana myb domain protein 104 (MYB104), partial mRNA | myb domain protein 104(MYB104) | coding protein | psRNATarget |