ncRNA ID | novel_ath_miR1014 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr2:7178373-7178474 [+] |
Reference genome | TAIR10 |
Source | SRR1266859;SRR1266861 |
Length | 24 |
Mature sequence(if miRNA) | 79 - GAAAUAAAUCCUGGAGUUGGAACU - 102 |
Stem-loop(if miRNA) |
--         G           GC       A            A    U   UUUCAACUU AGGAUUUAUUU  UAAAAUG CUGCAAAAAUGU UAUA A   ||||||||| |||||||||||  ||||||| |||||||||||| ||||   AAGGUUGAG UCCUAAAUAAA  GUUUUAC GACGUUUUUACA AUAU A UC         G           GU       C            C    A |
Stem-loop sequence | UUUCAACUUGAGGAUUUAUUUGCUAAAAUGACUGCAAAAAUGUAUAUAUAAAUAUACACAUUUUUGCAGCCAUUUUGUGAAAUAAAUCCUGGAGUUGGAACU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_116268.4 |
|
1.0 | Arabidopsis thaliana plasma membrane intrinsic protein 1;4 (PIP1;4), mRNA | plasma membrane intrinsic protein 1;4(PIP1;4) | coding protein | psRNATarget |