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BaseInfo

ncRNA ID novel_ath_miR1014
Species Arabidopsis thaliana
Class miRNA
Genome position Chr2:7178373-7178474 [+]
Reference genome TAIR10
Source SRR1266859;SRR1266861
Length 24
Mature sequence(if miRNA) 79 - GAAAUAAAUCCUGGAGUUGGAACU - 102
Stem-loop(if miRNA) --         G           GC       A            A    U
  UUUCAACUU AGGAUUUAUUU  UAAAAUG CUGCAAAAAUGU UAUA A
  ||||||||| |||||||||||  ||||||| |||||||||||| ||||
  AAGGUUGAG UCCUAAAUAAA  GUUUUAC GACGUUUUUACA AUAU A
UC         G           GU       C            C    A
Stem-loop sequence UUUCAACUUGAGGAUUUAUUUGCUAAAAUGACUGCAAAAAUGUAUAUAUAAAUAUACACAUUUUUGCAGCCAUUUUGUGAAAUAAAUCCUGGAGUUGGAACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_116268.4
ncRNA:24   UCAAGGUUGAGGUCCUAAAUAAAG   1
  |||||*||||||||||||||||||
targets:1816   AGUUCAAACUCCAGGAUUUAUUUC   1839

1.0 Arabidopsis thaliana plasma membrane intrinsic protein 1;4 (PIP1;4), mRNA plasma membrane intrinsic protein 1;4(PIP1;4) coding protein psRNATarget