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BaseInfo

ncRNA ID novel_ath_miR1013
Species Arabidopsis thaliana
Class miRNA
Genome position Chr1:8239002-8239223 [-]
Reference genome TAIR10
Source SRR1266859
Length 24
Mature sequence(if miRNA) 199 - AUUUACAAGGAACUUUAAAGGGCU - 222
Stem-loop(if miRNA) --         GA C        -GC                AU     -----------GU        UUA     --        U                   A         A
  AUUUACAAG  A UUUAAAGG   UUUAAAAGAUUUACAA  GAUUU             AAAGAUUU   AAGGG  UUUAAAAG GUUUUGAAAGAUUUACAAG GAUUUUAAA C
  |||||||||  | ||||||||   ||||||||||||||||  |||||             ||||||||   |||||  |||||||| ||||||||||||||||||| |||||||||
  UAAAUGUUC  U AAAUUUUU   AAAUUUUCUAAAUGUU  CUAAA             UUUCUAAA   UUCCC  AAAUUUUC CAAAAUUUUUUAAAUGUUC UUAAAAUUU C
UC         UC -        ACA                CU     AUUUUCUCAAAAU        -UG     UA        C                   A         U
Stem-loop sequence AUUUACAAGGAACUUUAAAGGGCUUUAAAAGAUUUACAAAUGAUUUGUAAAGAUUUUUAAAGGGUUUAAAAGUGUUUUGAAAGAUUUACAAGAGAUUUUAAAACCUUUUAAAAUUACUUGUAAAUUUUUUAAAACCCUUUUAAAAUCCCUUGUAAAUCUUUUAAAACUCUUUUAAAAUCUCUUGUAAAUCUUUUAAAACAUUUUUAAAUCUCUUGUAAAUCU