Search result

BaseInfo

ncRNA ID novel_ath_miR1007
Species Arabidopsis thaliana
Class miRNA
Genome position Chr4:4098002-4098136 [-]
Reference genome TAIR10
Source SRR1266859;SRR1266870
Length 24
Mature sequence(if miRNA) 112 - UCAAGGUUGCUUUUGGUUGUGACU - 135
Stem-loop(if miRNA) -   A   -U    U    UG  -   UG  GUA     -----U     -  C  U  C    G  -     
 UCA GGU  GCUU UGGU  UG ACU  UU   UGACG      UUCUG CA UG UU AGAC CA AAGAGA
 ||| |||  |||| ||||  || |||  ||   |||||      ||||| || || || |||| || |||||G
 AGU CUA  CGAG ACCA  AC UGA  GG   AUUGU      AAGAU GU AU AA UUUG GU UUCUCU
G   -   UU    U    GU  G   GU  --A     UUAACU     U  U  U  -    G  C     
Stem-loop sequence UCAAGGUUGCUUUUGGUUGUGACUUGUUGUAUGACGUUUCUGCACUGUUUCAGACGCAAAGAGAGUCUCUUCUGGGUUUAAUUAUUGUUAGAAUCAAUUUGUUAAGGUGAGUGCAUGACCAUGAGCUUAUCUGAG