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BaseInfo

ncRNA ID	ath-miRf10536-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - UACUCGACUAGGGGGUCGAGU - NA
Stem-loop(if miRNA)	G              -     -------AG   AC    G G  G GGUCAGGUGGUGUGACAAAGUGUUACUCGACCCAGUGGUCGA AUACUCGACUUC UGGUCGAGUAACGU GGCCG         UGA  GUCA A UG U                                          G |||||||||||| |||||||||||||| |||||         |||  |||| | || | UGUGAGCUGGGG AUCAGCUCAUUGUA CCUCG         GUU  AGUG A CU G                                          U             G              A     GUAAGAAUG   --    - U  - GGGGACCAGCUCAUUGGUAUGAGGUCCGGUGAGCUACUGUGG
Stem-loop sequence	AUACUCGACUUCGUGGUCGAGUAACGUGGCCGAGUGAACGUCAGAGUGGUGGUCAGGUGGUGUGACAAAGUGUUACUCGACCCAGUGGUCGAGUGGUGUCAUCGAGUGGCCUGGAGUAUGGUUACUCGACCAGGGGGUCUAGUGAUUGGUAAGAAUGGCUCCAAUGUUACUCGACUAGGGGGUCGAGUGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT025674.1	ncRNA:21   UGAGCUGGGGGAUCAGCUCAU   1   ||||||||||||=|||||||| targets:310   ACUCGACCCCCUGGUCGAGUA   330 Target Full Sequence	1.5	Arabidopsis thaliana	NA	coding protein	psRNATarget
DQ069808.1	ncRNA:21   UGAGCUGGGGGAUCAGCUCAU   1   ||||||||||||=|||||||| targets:92   ACUCGACCCCCUGGUCGAGUA   112 Target Full Sequence	1.5	Arabidopsis thaliana At2g10880 mRNA, partial sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:21   UGAGCUGGGGGAUCAGCUCAU   1   ||||||||||||=|||||||| targets:183   ACUCGACCCCCUGGUCGAGUA   203 Target Full Sequence	1.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:21   UGAGCUGGGGGAUCAGCUCAU   1   ||||||||||||=|||||||| targets:232   ACUCGACCCCCUGGUCGAGUA   252 Target Full Sequence	1.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:21   UGAGCUGGGGGAUCAGCUCAU   1   ||||||||||||=|||||||| targets:183   ACUCGACCCCCUGGUCGAGUA   203 Target Full Sequence	1.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:21   UGAGCUGGGGGAUCAGCUCAU   1   ||||||||||||=|||||||| targets:232   ACUCGACCCCCUGGUCGAGUA   252 Target Full Sequence	1.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
EF183192.1	ncRNA:21   UGAGCUGGGGGAUCAGCUCAU   1   ||||||||||||=|||||||| targets:126   ACUCGACCCCCUGGUCGAGUA   146 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183193.1	ncRNA:21   UGAGCUGGGGGAUCAGCUCAU   1   ||||||||||||=|||||||| targets:501   ACUCGACCCCCUGGUCGAGUA   521 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183191.1	ncRNA:21   UGAGCUGGGGGAUCAGCUCAU   1   ||||||||||||=|||||||| targets:501   ACUCGACCCCCUGGUCGAGUA   521 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183042.1	ncRNA:21   UGAGCUGGGGGAUCAGCUCAU   1   ||||||||||||=|||||||| targets:1573   ACUCGACCCCCUGGUCGAGUA   1593 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
AY231407.1	ncRNA:21   UGAGCUGGGGGAUCAGCUCAU   1   ||||||||||||||||*|||| targets:446   ACUCGACCCCCUAGUCAAGUA   466 Target Full Sequence	1.5	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget
BT015478.1	ncRNA:21   UGAGCUGGGGGAUCAGCUCAU   1   ||||*|||||||=|||||||| targets:303   ACUCAACCCCCUGGUCGAGUA   323 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:21   UGAGCUGGGGGAUCAGCUCAU   1   ||||*|||||||=|||||||| targets:303   ACUCAACCCCCUGGUCGAGUA   323 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
AY231407.1	ncRNA:21   UGAGCUGGGGGAUCAGCUCAU   1   ||*|||||||||=|||||||| targets:585   ACYCGACCCCCUGGUCGAGUA   605 Target Full Sequence	2.5	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget
LC130495.1	ncRNA:21   UGAGCUGGGGGAUCAGCUCAU   1   **||*|||||||||||*|||| targets:4414   CAUCCACCCCCUAGUCCAGUA   4434 Target Full Sequence	2.5	Arabidopsis thaliana EXA1 mRNA for GYF domain-containing protein, complete cds, ecotype: Columbia-0	NA	coding protein	psRNATarget
NM_123660.3	ncRNA:21   UGAGCUGGGGGAUCAGCUCAU   1   **||*|||||||||||*|||| targets:4499   CAUCCACCCCCUAGUCCAGUA   4519 Target Full Sequence	2.5	Arabidopsis thaliana GYF domain-containing protein mRNA	GYF domain-containing protein(AT5G42950)	coding protein	psRNATarget