ncRNA ID | novel_ath_miR987 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr4:2072760-2072845 [-] |
Reference genome | TAIR10 |
Source | SRR1266003 |
Length | 22 |
Mature sequence(if miRNA) | 1 - AUUCCUUUGUAAAUCUCUUAAA - 22 |
Stem-loop(if miRNA) |
--   A              -       -  A    C    AUU   UAA AGAUUUACAAGGGA UUUUAAA AU UUUA AGGG   G   ||| |||||||||||||| ||||||| || |||| ||||   AUU UCUAAAUGUUUCCU AAGAUUU UA AAAU UCCC   A AA   C              U       C  A    U    AAA |
Stem-loop sequence | UAAAAGAUUUACAAGGGAUUUUAAAAUAUUUACAGGGAUUGAAAACCCUUUAAAAAUCUUUAGAAUUCCUUUGUAAAUCUCUUAAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK227786.1 |
|
2.0 | Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL14-35-K14 | NA | coding protein | psRNATarget |