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BaseInfo

ncRNA ID novel_ath_miR981
Species Arabidopsis thaliana
Class miRNA
Genome position Chr5:12752614-12752705 [-]
Reference genome TAIR10
Source SRR1266000;SRR1266001
Length 21
Mature sequence(if miRNA) 1 - UGAAGCUGAAUCUUGGUCAAC - 21
Stem-loop(if miRNA) ---UU      G      AACAC   GA ----  CAAACAGCAACGAAUC
     CUAAGA UUCAGU     CGU  G    UU                U
     |||||| ||||||     |||  |    ||
     GGUUCU AAGUCG     UAG  A    AC                U
CAACU      -      --AAG   -- UGCA  UUUAGCCGUAGGUAAC
Stem-loop sequence UUCUAAGAGUUCAGUAACACCGUGAGUUCAAACAGCAACGAAUCUUCAAUGGAUGCCGAUUUCAACGUAGAUGAAGCUGAAUCUUGGUCAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK230139.1
ncRNA:21   CAACUGGUUCUAAGUCGAAGU   1
  |||||||||||||||||||||
targets:3145   GUUGACCAAGAUUCAGCUUCA   3165

0.0 Arabidopsis thaliana mRNA for hypothetical protein, clone: RAFL22-82-O04 NA coding protein psRNATarget