ncRNA ID | novel_ath_miR976 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr5:21821023-21821249 [+] |
Reference genome | TAIR10 |
Source | SRR1265999 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAGGAGCAUCCACAUUGUAUAACU - 24 |
Stem-loop(if miRNA) |
--AA   G               A  -AACAUA          CACACU   UC              GAAAGU           A  GAC  C   CC              UGA     GGA CAUCCACAUUGUAUA CU       UGUGUCUUCC      AAU  AAUUAUUAAAAUGU      UGUUUUUAAAU GA   UC CUU  CAAAAUGUUUUAAU   G     ||| ||||||||||||||| ||       ||||||||||      |||  ||||||||||||||      ||||||||||| ||   || |||  ||||||||||||||     UCU GUAGGUGUAACGUGU GA       ACACAGAAGG      UUA  UUAAUAAUUUUACA      ACAAAAAUUUA CU   AG GAG  GUUUUACAGAAUUA   A GAAA   G               A  CUUACAA          AAAUUU   UA              -AACCU           -  -AU  U   -A              CAC |
Stem-loop sequence | AAGGAGCAUCCACAUUGUAUAACUAACAUAUGUGUCUUCCCACACUAAUUCAAUUAUUAAAAUGUGAAAGUUGUUUUUAAAUAGAGACUCCCUUCCCAAAAUGUUUUAAUUGAGACACAUUAAGACAUUUUGAGAGUGAUAUCAUUUAAAAACAUCCAAACAUUUUAAUAAUUAUAUUUUUAAAGGAAGACACAAACAUUCAGAUGUGCAAUGUGGAUGGUCUAAAG |