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BaseInfo

ncRNA ID	novel_ath_miR970
Species	Arabidopsis thaliana
Class	miRNA
Genome position	Chr3:10378299-10378514 [+]
Reference genome	TAIR10
Source	SRR1265998
Length	21
Mature sequence(if miRNA)	196 - UAGAGUAGGGUUGGAGAUGCC - 216
Stem-loop(if miRNA)	--G              C  UUU     U   ACUAACUAUAUUCAUUAGCAACUUAAUUCUACAUUGAUUUUAGAGUAUAAGAUAAGAGAAAUUUUUGUGUUGCCAA    AUUUUCAAUUUUAC CU   GUAAA UCU                                                                            U    |||||||||||||| ||   ||||| |||                                                                            U    UAGAGGUUGGGAUG GA   CAUUU UAC                                                                            U CCG              A  -UU     U   GUUUUGUAAAGAGAUUGGGAUGAGAUAUUAACUAAGAUUUUAUCUCUAAAGACGUUGAGAUAUAUAUUCACAAUUG
Stem-loop sequence	GAUUUUCAAUUUUACCCUUUUGUAAAUUCUACUAACUAUAUUCAUUAGCAACUUAAUUCUACAUUGAUUUUAGAGUAUAAGAUAAGAGAAAUUUUUGUGUUGCCAAUUUGUUAACACUUAUAUAUAGAGUUGCAGAAAUCUCUAUUUUAGAAUCAAUUAUAGAGUAGGGUUAGAGAAAUGUUUUGCAUUUUUACUUAGAGUAGGGUUGGAGAUGCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001332453.1	ncRNA:21   CCGUAGAGGUUGGGAUGAGAU   1   **=||||*||||||||||||* targets:116   UUUAUCUACAACCCUACUCUC   136 Target Full Sequence	3.0	Arabidopsis thaliana catalase 3 (CAT3), mRNA	catalase 3(CAT3)	coding protein	psRNATarget
NM_001332452.1	ncRNA:21   CCGUAGAGGUUGGGAUGAGAU   1   **=||||*||||||||||||* targets:788   UUUAUCUACAACCCUACUCUC   808 Target Full Sequence	3.0	Arabidopsis thaliana catalase 3 (CAT3), mRNA	catalase 3(CAT3)	coding protein	psRNATarget
NM_001035995.4	ncRNA:21   CCGUAGAGGUUGGGAUGAGAU   1   **=||||*||||||||||||* targets:788   UUUAUCUACAACCCUACUCUC   808 Target Full Sequence	3.0	Arabidopsis thaliana catalase 3 (CAT3), mRNA	catalase 3(CAT3)	coding protein	psRNATarget