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BaseInfo

ncRNA ID	novel_ath_miR963
Species	Arabidopsis thaliana
Class	miRNA
Genome position	Chr3:13632987-13633207 [-]
Reference genome	TAIR10
Source	SRR1262601
Length	23
Mature sequence(if miRNA)	199 - UAGGGUUUAAGGUUUAGGGUUUA - 221
Stem-loop(if miRNA)	--    G      G      G      G      G      G      G      G      G      G      G      G      G      G      G        UAGG UUUAAG UUUAGG UUUAGG UUUAGG UUUAGG UUUAGG UUUAGG UUUAGG UUUAGG UUUAGG UUUAGG UUUAGG UUUAGG UUUAGG UUUAGG   |||| |||||| |||||| |||||| |||||| |||||| |||||| |||||| |||||| |||||| |||||| |||||| |||||| |||||| |||||| |||||G   AUUU GGAUUU GGAUUU GGAUUU GGAUUU GGAUUU GGAUUU GGAUUU GGAUUU GGAUUU GGAUUU GGAUUU GGAUUU GGAUUU GGAUUU GGAUUU GG    G      G      G      G      G      G      G      G      G      G      G      G      G      G      G
Stem-loop sequence	UAGGGUUUAAGGUUUAGGGUUUAGGGUUUAGGGUUUAGGGUUUAGGGUUUAGGGUUUAGGGUUUAGGGUUUAGGGUUUAGGGUUUAGGGUUUAGGGUUUAGGGUUUAGGGUUUAGGGUUUAGGGUUUAGGGUUUAGGGUUUAGGGUUUAGGGUUUAGGGUUUAGGGUUUAGGGUUUAGGGUUUAGGGUUUAGGGUUUAGGGUUUAGGGUUUAGGGUUUAGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_201763.2	ncRNA:23   AUUUGGGAUUUGGAAUUUGGGAU   1   ||||||=|||||||||||||=|| targets:46   UAAACCUUAAACCUUAAACCUUA   68 Target Full Sequence	2.5	Arabidopsis thaliana Tetratricopeptide repeat (TPR)-like superfamily protein mRNA	Tetratricopeptide repeat (TPR)-like superfamily protein(AT2G20710)	coding protein	psRNATarget
BX819495.1	ncRNA:23   AUUUGGGAUUUGGAAUUUGGGAU   1   ||||||=|||||||||||||=|| targets:46   UAAACCUUAAACCUUAAACCUUA   68 Target Full Sequence	2.5	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB83ZF12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
NM_127635.4	ncRNA:23   AUUUGGGAUUUGGAAUUUGGGAU   1   ||||||=|||||||||||||=|| targets:126   UAAACCUUAAACCUUAAACCUUA   148 Target Full Sequence	2.5	Arabidopsis thaliana Tetratricopeptide repeat (TPR)-like superfamily protein mRNA	Tetratricopeptide repeat (TPR)-like superfamily protein(AT2G20710)	coding protein	psRNATarget
BX820712.1	ncRNA:23   AUUUGGGAUUUGGAAUUUGGGAU   1   ||||||=|||||||||||||=|| targets:19   UAAACCUUAAACCUUAAACCUUA   41 Target Full Sequence	2.5	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH61ZG12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
BT015322.1	ncRNA:23   AUUUGGGAUUUGGAAUUUGGGAU   1   ||||||=|||||||||||||=|| targets:18   UAAACCUUAAACCUUAAACCUUA   40 Target Full Sequence	2.5	Arabidopsis thaliana At2g20710 mRNA, complete cds	NA	coding protein	psRNATarget