Search result

BaseInfo

ncRNA ID novel_ath_miR959
Species Arabidopsis thaliana
Class miRNA
Genome position Chr1:13079602-13079713 [+]
Reference genome TAIR10
Source SRR1262546
Length 24
Mature sequence(if miRNA) 89 - GUCAAGAUUUGUAAGUGGAAGGUU - 112
Stem-loop(if miRNA) --   - UG          -A   --U      UU      GU     -    -     U
  CCU C  CUUAUAAGUU  GAC   UGUUGG  UUUUAU  AAUAU GGAU GACUA A
  ||| |  ||||||||||  |||   ||||||  ||||||  ||||| |||| ||||| U
  GGA G  GAAUGUUUAG  CUG   AUAAUU  GGAAUG  UUGUA CCUA UUGAU U
UU   A GU          AA   UGU      -U      --     A    G     U
Stem-loop sequence CCUCUGCUUAUAAGUUAGACUUGUUGGUUUUUUAUGUAAUAUGGAUGACUAUAUUUUAGUUGAUCCAAUGUUGUAAGGUUUAAUAUGUGUCAAGAUUUGUAAGUGGAAGGUU