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BaseInfo

ncRNA ID	novel_ath_miR952
Species	Arabidopsis thaliana
Class	miRNA
Genome position	Chr1:15263762-15263874 [-]
Reference genome	TAIR10
Source	ERR1297314
Length	24
Mature sequence(if miRNA)	90 - UAAGGUUUAAGGUUAAGGUUUUGU - 113
Stem-loop(if miRNA)	--    G     G      G   UGUG      G     G   U   G      G G   UAAG UUUAA GUUAAG UUU    UUUAGG UUUAG UUU AAG UUUAGG U U   |||| ||||| |||||| |||    |||||| ||||| ||| ||| |||||| |   AUUU GGAUU CGAUUU GAA    GGAUUU GGAUU AGA UUU GGAUUU G A GG    G     G      G   UUUG      G     G   -   G      G C
Stem-loop sequence	UAAGGUUUAAGGUUAAGGUUUUGUGUUUAGGGUUUAGGUUUUAAGGUUUAGGGUGUACGGUUUAGGGUUUAGAGUUAGGGUUUAGGGUUUAAGGUUUAGCGUUAGGGUUUAGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_201763.2	ncRNA:24   UGU--UUUGGAAUU-GGAAUUUGGAAU   1   |==--|||||||||-|||||||||||| targets:42   AUGUUAAACCUUAAACCUUAAACCUUA   68 Target Full Sequence	3.0	Arabidopsis thaliana Tetratricopeptide repeat (TPR)-like superfamily protein mRNA	Tetratricopeptide repeat (TPR)-like superfamily protein(AT2G20710)	coding protein	psRNATarget
BX819495.1	ncRNA:24   UGU--UUUGGAAUU-GGAAUUUGGAAU   1   |==--|||||||||-|||||||||||| targets:42   AUGUUAAACCUUAAACCUUAAACCUUA   68 Target Full Sequence	3.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB83ZF12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
NM_127635.4	ncRNA:24   UGU--UUUGGAAUU-GGAAUUUGGAAU   1   |==--|||||||||-|||||||||||| targets:122   AUGUUAAACCUUAAACCUUAAACCUUA   148 Target Full Sequence	3.0	Arabidopsis thaliana Tetratricopeptide repeat (TPR)-like superfamily protein mRNA	Tetratricopeptide repeat (TPR)-like superfamily protein(AT2G20710)	coding protein	psRNATarget
BX820712.1	ncRNA:24   UGU--UUUGGAAUU-GGAAUUUGGAAU   1   |==--|||||||||-|||||||||||| targets:15   AUGUUAAACCUUAAACCUUAAACCUUA   41 Target Full Sequence	3.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH61ZG12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
BT015322.1	ncRNA:24   UGU--UUUGGAAUU-GGAAUUUGGAAU   1   |==--|||||||||-|||||||||||| targets:14   AUGUUAAACCUUAAACCUUAAACCUUA   40 Target Full Sequence	3.0	Arabidopsis thaliana At2g20710 mRNA, complete cds	NA	coding protein	psRNATarget