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BaseInfo

ncRNA ID novel_ath_miR947
Species Arabidopsis thaliana
Class miRNA
Genome position Chr5:11520692-11520820 [-]
Reference genome TAIR10
Source SRR1262545
Length 21
Mature sequence(if miRNA) 109 - CCGUUCUGUCGAAGGGUACUA - 129
Stem-loop(if miRNA) --   U      GAA     -    AAGG    ----            ---     GGG  GA    UC
  CCG UCUGUC   GGGUA CUAU    AAAU    AGAGACUUUGAU   GUUGC   CU  UAUU  U
  ||| ||||||   ||||| ||||    ||||    ||||||||||||   |||||   ||  ||||
  GGU AGACAG   CUUAU GAUA    UUUG    UCUUUGGAACUG   CAACG   GA  AUAG  G
GA   U      -AA     A    CAAA    GGGU            UAU     -AA  -G    GA
Stem-loop sequence CCGUUCUGUCGAAGGGUACUAUAAGGAAAUAGAGACUUUGAUGUUGCGGGCUGAUAUUUCUGAGGAUAGAGAAGCAACUAUGUCAAGGUUUCUUGGGGUUUAAACAUAGAUAUUCAAGACAGAUUGGAG