ncRNA ID | novel_ath_miR947 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr5:11520692-11520820 [-] |
Reference genome | TAIR10 |
Source | SRR1262545 |
Length | 21 |
Mature sequence(if miRNA) | 109 - CCGUUCUGUCGAAGGGUACUA - 129 |
Stem-loop(if miRNA) |
--   U      GAA     -    AAGG    ----            ---     GGG  GA    UC   CCG UCUGUC   GGGUA CUAU    AAAU    AGAGACUUUGAU   GUUGC   CU  UAUU  U   ||| ||||||   ||||| ||||    ||||    ||||||||||||   |||||   ||  ||||   GGU AGACAG   CUUAU GAUA    UUUG    UCUUUGGAACUG   CAACG   GA  AUAG  G GA   U      -AA     A    CAAA    GGGU            UAU     -AA  -G    GA |
Stem-loop sequence | CCGUUCUGUCGAAGGGUACUAUAAGGAAAUAGAGACUUUGAUGUUGCGGGCUGAUAUUUCUGAGGAUAGAGAAGCAACUAUGUCAAGGUUUCUUGGGGUUUAAACAUAGAUAUUCAAGACAGAUUGGAG |