Search result

BaseInfo

ncRNA ID novel_ath_miR942
Species Arabidopsis thaliana
Class miRNA
Genome position Chr5:20473917-20474068 [-]
Reference genome TAIR10
Source SRR1262389;SRR1262546
Length 21
Mature sequence(if miRNA) 1 - UGUAGAAUUCGGCUAACGCUU - 21
Stem-loop(if miRNA) --U  G       U               CAUGG         ACCA       U   A         CU     U  U
   CG UAGUCGA UUCUACAUCGACCUU     UGUUAGUAA    AUUAAAU GUG UGAGUCAAA  AUACU UG U
   || ||||||| |||||||||||||||     |||||||||    ||||||| ||| |||||||||  ||||| || C
   GC AUCGGCU AAGAUGUAGCUGGAA     ACAAUCAUU    UAGUUUG UAC ACUCAGUUU  UGUGG AU G
UUC  A       U               -----         --GA       C   A         AC     U  U
Stem-loop sequence UCGGUAGUCGAUUUCUACAUCGACCUUCAUGGUGUUAGUAAACCAAUUAAAUUGUGAUGAGUCAAACUAUACUUUGUUCGUUAUGGUGUCAUUUGACUCAACAUCGUUUGAUAGUUACUAACAAAGGUCGAUGUAGAAUUCGGCUAACGCUU