ncRNA ID | novel_ath_miR942 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr5:20473917-20474068 [-] |
Reference genome | TAIR10 |
Source | SRR1262389;SRR1262546 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UGUAGAAUUCGGCUAACGCUU - 21 |
Stem-loop(if miRNA) |
--U  G       U               CAUGG         ACCA       U   A         CU     U  U    CG UAGUCGA UUCUACAUCGACCUU     UGUUAGUAA    AUUAAAU GUG UGAGUCAAA  AUACU UG U    || ||||||| |||||||||||||||     |||||||||    ||||||| ||| |||||||||  ||||| || C    GC AUCGGCU AAGAUGUAGCUGGAA     ACAAUCAUU    UAGUUUG UAC ACUCAGUUU  UGUGG AU G UUC  A       U               -----         --GA       C   A         AC     U  U |
Stem-loop sequence | UCGGUAGUCGAUUUCUACAUCGACCUUCAUGGUGUUAGUAAACCAAUUAAAUUGUGAUGAGUCAAACUAUACUUUGUUCGUUAUGGUGUCAUUUGACUCAACAUCGUUUGAUAGUUACUAACAAAGGUCGAUGUAGAAUUCGGCUAACGCUU |