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BaseInfo

ncRNA ID	novel_ath_miR937
Species	Arabidopsis thaliana
Class	miRNA
Genome position	Chr1:8112651-8112847 [+]
Reference genome	TAIR10
Source	SRR1262389;SRR1262546
Length	21
Mature sequence(if miRNA)	1 - CAAGGACACAGUGUAAUAUUU - 21
Stem-loop(if miRNA)	--CAA   C     G        G       A   A   AGAACAAA  AUGAAACACAACAAUACUAUAAAGAUGUUUUGAGUUAAGGAGAGAGAUCAUC      GGA ACAGU UAAUAUUU UAAAGCA UUA CAU        UA                                                    A      ||| ||||| |||||||| ||||||| ||| |||        ||      CUU UGUUA AUUAUAAA AUUUCGU AAU GUA        CG                                                    A AUGUA   C     G        A       C   A   -----AUU  UAAAUUCGUUCAUUACUUUGUGUUGUUGUGCCAUCUUUAAAUUCGUUCGUGA
Stem-loop sequence	CAAGGACACAGUGUAAUAUUUGUAAAGCAAUUAACAUAGAACAAAUAAUGAAACACAACAAUACUAUAAAGAUGUUUUGAGUUAAGGAGAGAGAUCAUCAAAGUGCUUGCUUAAAUUUCUACCGUGUUGUUGUGUUUCAUUACUUGCUUAAAUGCUUAAUGAUAACUGCUUUAAAAAUAUUAGAUUGUCUUCAUGUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AY800592.1	ncRNA:21   UUUAUAAUGUGACACAGGAAC   1   |*|||||*||||||||*|||| targets:513   AUAUAUUCCACUGUGUGCUUG   533 Target Full Sequence	2.5	Arabidopsis thaliana clone H0000001141 hypothetical protein (AT1G22080) mRNA, complete cds	NA	coding protein	psRNATarget
AY800594.1	ncRNA:21   UUUAUAAUGUGACACAGGAAC   1   |*|||||*||||||||*|||| targets:512   AUAUAUUCCACUGUGUGCUUG   532 Target Full Sequence	2.5	Arabidopsis thaliana clone H0000001143 hypothetical protein (AT1G22080) mRNA, complete cds, alternatively spliced	NA	coding protein	psRNATarget
AY800593.1	ncRNA:21   UUUAUAAUGUGACACAGGAAC   1   |*|||||*||||||||*|||| targets:513   AUAUAUUCCACUGUGUGCUUG   533 Target Full Sequence	2.5	Arabidopsis thaliana clone H0000001142 hypothetical protein (AT1G22080) mRNA, complete cds, alternatively spliced	NA	coding protein	psRNATarget
NM_001123858.1	ncRNA:21   UUUAUAAUGUGACACAGGAAC   1   |*|||||*||||||||*|||| targets:513   AUAUAUUCCACUGUGUGCUUG   533 Target Full Sequence	2.5	Arabidopsis thaliana Cysteine proteinases superfamily protein mRNA	Cysteine proteinases superfamily protein(AT1G22080)	coding protein	psRNATarget
AY800595.1	ncRNA:21   UUUAUAAUGUGACACAGGAAC   1   |*|||||*||||||||*|||| targets:512   AUAUAUUCCACUGUGUGCUUG   532 Target Full Sequence	2.5	Arabidopsis thaliana clone H0000001144 hypothetical protein (AT1G22080) mRNA, complete cds, alternatively spliced	NA	coding protein	psRNATarget
NM_102058.2	ncRNA:21   UUUAUAAUGUGACACAGGAAC   1   |*|||||*||||||||*|||| targets:512   AUAUAUUCCACUGUGUGCUUG   532 Target Full Sequence	2.5	Arabidopsis thaliana Cysteine proteinases superfamily protein mRNA	Cysteine proteinases superfamily protein(AT1G22080)	coding protein	psRNATarget