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BaseInfo

ncRNA ID	novel_ath_miR935
Species	Arabidopsis thaliana
Class	miRNA
Genome position	Chr3:13377007-13377121 [+]
Reference genome	TAIR10
Source	SRR1262389;SRR1262546
Length	23
Mature sequence(if miRNA)	93 - GCGGCGACGAAACGAACAGACUA - 115
Stem-loop(if miRNA)	--            A  G     ------AA     A    ---CA    C        C G   GUCUGUUCGUUU GU GCCGC        GCGGC GCGG     GCGG UGCGGCAA G U   |||||||||||| || |||||        ||||| ||||     |||| |||||||| |   CAGACAAGCAAA CA CGGCG        CGCCG CGCC     CGUU ACGCCGUU C A AU            G  G     CCCAUAAA     A    AUCUG    C        A A
Stem-loop sequence	GUCUGUUCGUUUAGUGGCCGCAAGCGGCAGCGGCAGCGGCUGCGGCAACGGUAACAUUGCCGCACUUGCGUCUACCGCAGCCGCAAAUACCCGCGGCGACGAAACGAACAGACUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_128774.4	ncRNA:23   AUCAGACAAGCAAAGCAGCGGCG   1   ||||||||||||||||||||||| targets:1251   UAGUCUGUUCGUUUCGUCGCCGC   1273 Target Full Sequence	0.0	Arabidopsis thaliana Haloacid dehalogenase-like hydrolase (HAD) superfamily protein mRNA	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein(AT2G32150)	coding protein	psRNATarget
NM_001161133.2	ncRNA:23   AUC--AG---ACAAGCAAAGCAGCGGCG   1   *||--||---|||||||||||||||||| targets:319   CAGGAUCCAUUGUUCGUUUCGUCGCCGC   346 Target Full Sequence	3.0	Arabidopsis thaliana hypothetical protein partial mRNA	hypothetical protein(AT3G11165)	coding protein	psRNATarget
NM_001337915.1	ncRNA:23   AUC--AG---ACAAGCAAAGCAGCGGCG   1   *||--||---|||||||||||||||||| targets:360   CAGGAUCCAUUGUUCGUUUCGUCGCCGC   387 Target Full Sequence	3.0	Arabidopsis thaliana hypothetical protein partial mRNA	hypothetical protein(AT3G11165)	coding protein	psRNATarget