ncRNA ID | novel_ath_miR930 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr5:22322721-22322896 [-] |
Reference genome | TAIR10 |
Source | DRR014210 |
Length | 24 |
Mature sequence(if miRNA) | 153 - UUGAUGAUUCGACAAAGUGAAGGG - 176 |
Stem-loop(if miRNA) |
--   A                                           G                   C   A        C  UUU   UUG UGAUUCGACAAAGUGAAGGGUUUGGUCUUCAGAAAGUUUUCUU CAAGGUUCAAGAACGGAUC UCA AAUUCAAA UG   C   ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||| ||   AAC ACUGAGCUGUUUCACUUCCCAAACCAGAGGUCUUUCAAAAGAA GUUCCAAGUUCUUGCCUAG AGU UUAAGUUU AC   U GG   C                                           G                   A   G        A  CAC |
Stem-loop sequence | UUGAUGAUUCGACAAAGUGAAGGGUUUGGUCUUCAGAAAGUUUUCUUGCAAGGUUCAAGAACGGAUCCUCAAAAUUCAAACUGUUUCUCACCAAUUUGAAUUGUGAAGAUCCGUUCUUGAACCUUGGAAGAAAACUUUCUGGAGACCAAACCCUUCACUUUGUCGAGUCACCAAGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK229033.1 |
|
2.5 | Arabidopsis thaliana mRNA for putative reverse transcriptase, complete cds, clone: RAFL16-33-I07 | NA | coding protein | psRNATarget |