Search result

BaseInfo

ncRNA ID novel_ath_miR928
Species Arabidopsis thaliana
Class miRNA
Genome position Chr2:5903750-5903813 [-]
Reference genome TAIR10
Source SRR1164434
Length 23
Mature sequence(if miRNA) 1 - AUCUGCGGAUUGGUGACAUUGUU - 23
Stem-loop(if miRNA) --UAU       -----   --     AGA   GAG
     UGUCGCU     GCA  UUGAU   UGU   A
     |||||||     |||  |||||   |||
     ACAGUGG     CGU  AACUA   ACG   A
UUGUU       UUAGG   CU     -GA   AGA
Stem-loop sequence UAUUGUCGCUGCAUUGAUAGAUGUGAGAAAGAGCAAGAUCAAUCUGCGGAUUGGUGACAUUGUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT010997.1
ncRNA:23   UUGUUACAGUGGUUAGGCGUCUA   1
  *||||||*|||||||||*|||||
targets:660   CACAAUGCCACCAAUCCACAGAU   682

2.5 Arabidopsis thaliana At2g06030 mRNA, partial cds NA coding protein psRNATarget
BT010706.2
ncRNA:23   UUGUUACAGUGGUUAGGCGUCUA   1
  *||||||*|||||||||*|||||
targets:734   CACAAUGCCACCAAUCCACAGAU   756

2.5 Arabidopsis thaliana At2g06030 mRNA, complete cds NA coding protein psRNATarget