Search result

BaseInfo

ncRNA ID	novel_ath_miR925
Species	Arabidopsis thaliana
Class	miRNA
Genome position	Chr5:12519827-12519932 [-]
Reference genome	TAIR10
Source	SRR1164433
Length	23
Mature sequence(if miRNA)	1 - UACUUUGGGUUGGGAUGUGUCUA - 23
Stem-loop(if miRNA)	--    G    G    GA     -   -     U   G    ----         U U   GAUA GUUC UAAC  CAGAG AUA GUGUC CAU UAGU    UCUAGUUCG G U   |||| |||| ||||  ||||| ||| ||||| ||| ||||    ||||||||| |   CUGU UAGG GUUG  GUUUC UAU CGCGG GUG AUCA    AGAUCAGGC C A AU    G    -    -G     A   U     -   G    GAAU         - U
Stem-loop sequence	GAUAGGUUCGUAACGACAGAGAUAGUGUCUCAUGUAGUUCUAGUUCGUGUUAUCCGGACUAGAUAAGACUAGGUGGGCGCUUAUACUUUGGGUUGGGAUGUGUCUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EF183005.1	ncRNA:23   AUCUGUGUAGGGUUGGGUUUCAU   1   ||*|||||||||||||||||||| targets:3076   UAAACACAUCCCAACCCAAAGUA   3098 Target Full Sequence	0.0	Arabidopsis thaliana clone asmbl_10069 unknown mRNA sequence	NA	coding protein	psRNATarget