ncRNA ID | ath-miRf10528-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 25 |
Mature sequence(if miRNA) | NA - AGGUGAAGACACUCGACCUCGGGGU - NA |
Stem-loop(if miRNA) |
                      AUG G   -GA  GAAG      -AGA           C G U CACUCGACCUCGGGGUCGAGUG   U AUC   GU    GACAGG    UACUCGACUUC U G U ||||||||||||||||||||||   | |||   ||    ||||||    ||||||||||| | | G GUGAGCUGGGGCUCCAGCUCAC   A UGG   UA    CUGUCU    AUGAGCUGGAG A U A                       AGA G   AAG  ---A      GGUG           U G G |
Stem-loop sequence | CACUCGACCUCGGGGUCGAGUGAUGUGAUCGAGUGAAGGACAGGAGAUACUCGACUUCCUGGUUGAGUGAUGAGGUCGAGUAGUGGUCUGUCAAUGAAGGUGAAGACACUCGACCUCGGGGUCGAGUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EF183194.1 |
|
0.0 | Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EF183042.1 |
|
1.0 | Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence | NA | coding protein | psRNATarget | |||||||||
NM_103391.1 |
|
1.0 | Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA | DNAse I-like superfamily protein(AT1G40390) | coding protein | psRNATarget | |||||||||
EF183042.1 |
|
2.5 | Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence | NA | coding protein | psRNATarget |