Search result

BaseInfo

ncRNA ID novel_ath_miR921
Species Arabidopsis thaliana
Class miRNA
Genome position Chr1:16325085-16325183 [+]
Reference genome TAIR10
Source ERR1297313
Length 23
Mature sequence(if miRNA) 77 - GACGAUUAGAACAUCAUUAGAUU - 99
Stem-loop(if miRNA) --          ACGA   -     A  - UG     GAA     UGAU   C
  UCUGAUGAUG    UGA CGUUA CA U  AUUUU   UCUGA    GAC A
  ||||||||||    ||| ||||| || |  |||||   |||||    |||
  AGAUUACUAC    AUU GCAGU GU G  UAGAG   AGAUU    UUG U
UU          -AAG   A     A  G GU     -GA     ---U   G
Stem-loop sequence UCUGAUGAUGACGAUGACGUUAACAUUGAUUUUGAAUCUGAUGAUGACCAUGGUUUUUAGAAGGAGAUUGGGUGAUGACGAUUAGAACAUCAUUAGAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001125900.2
ncRNA:23   UUAGAUUACUACAAGAUUAGCAG   1
  |||=||||||||||=|||||||=
targets:358   AAUUUAAUGAUGUUUUAAUCGUU   380

2.5 Arabidopsis thaliana hypothetical protein mRNA hypothetical protein(AT5G44585) coding protein psRNATarget
EF183147.1
ncRNA:23   UUAGAUUACUACAAGAUUAGCAG   1
  |||=||||||||||=|||||||=
targets:267   AAUUUAAUGAUGUUUUAAUCGUU   289

2.5 Arabidopsis thaliana clone asmbl_16108 unknown mRNA sequence NA coding protein psRNATarget