ncRNA ID | novel_ath_miR921 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr1:16325085-16325183 [+] |
Reference genome | TAIR10 |
Source | ERR1297313 |
Length | 23 |
Mature sequence(if miRNA) | 77 - GACGAUUAGAACAUCAUUAGAUU - 99 |
Stem-loop(if miRNA) |
--          ACGA   -     A  - UG     GAA     UGAU   C   UCUGAUGAUG    UGA CGUUA CA U  AUUUU   UCUGA    GAC A   ||||||||||    ||| ||||| || |  |||||   |||||    |||   AGAUUACUAC    AUU GCAGU GU G  UAGAG   AGAUU    UUG U UU          -AAG   A     A  G GU     -GA     ---U   G |
Stem-loop sequence | UCUGAUGAUGACGAUGACGUUAACAUUGAUUUUGAAUCUGAUGAUGACCAUGGUUUUUAGAAGGAGAUUGGGUGAUGACGAUUAGAACAUCAUUAGAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_001125900.2 |
|
2.5 | Arabidopsis thaliana hypothetical protein mRNA | hypothetical protein(AT5G44585) | coding protein | psRNATarget | |||||||||
EF183147.1 |
|
2.5 | Arabidopsis thaliana clone asmbl_16108 unknown mRNA sequence | NA | coding protein | psRNATarget |